1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz02g12020.t1

Cz02g12020.t1


Description : Ribosomal protein S17/S11; 40S ribosomal protein S11, N-terminal [Interproscan].


Gene families : OG_01_0003480 (OrthoFinder) Phylogenetic Tree(s): OG0003480_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g12020.t1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000551.22 tig00000551_g2043.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 OrthoFinder
Cre12.g514500 30792578, RPS11 Protein biosynthesis.cytosolic ribosome.small subunit... 0.41 OrthoFinder
Dusal.0778s00006.1 33199653 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.04 OrthoFinder
EOD05251 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.21 OrthoFinder
OT_06G01520.1 No alias 40S ribosomal protein S11, N-terminal; Ribosomal protein... 0.19 OrthoFinder
PTI_12G03740.1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.25 OrthoFinder
Sro154_g070110.1 Contig2716.g21889 40S ribosomal protein S11 0.34 OrthoFinder
TP05G00420.1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.26 OrthoFinder
Vocar.0006s0303.1 32893913 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.04 OrthoFinder
XM_002501400.1 MICPUN_81184, 81184 Ribosomal protein 0.25 OrthoFinder
XM_003059434.1 MicpuC2_33883, 33883 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.13 OrthoFinder
lcl|BLLF01002834.1_cds_GFH25508.1_19985 HaLaN_23487, GFH25508 40S ribosomal protein S11 0.02 OrthoFinder
lcl|BLLF01005325.1_cds_GFH31049.1_25526 HaLaN_30009, GFH31049 Ribosomal_S17_N domain-containing protein 0.09 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61173.1_440 PRW61173 40S ribosomal S11 0.17 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491213.1_5841 KAA8491213 40S ribosomal protein S11 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 51 118
IPR032440 Ribosomal_S11_N 4 52
No external refs found!