1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz02g02220.t1

Cz02g02220.t1


Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g02220.t1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cre09.g398252 30780830 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder
Dusal.0165s00018.1 33193372 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
Dusal.0247s00003.1 33200440 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.03 OrthoFinder
Sro190_g081950.1 Contig3488.g27070 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.01 OrthoFinder
Sro3965_g352250.1 Contig1669.g15029 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.01 OrthoFinder
lcl|BLLF01000239.1_cds_GFH09494.1_3971 HaLaN_04650, GFH09494 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 42 190
No external refs found!