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  5. Cz01g45220.t1

Cz01g45220.t1


Description : SNF2-related, N-terminal domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000285 (OrthoFinder) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g45220.t1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.39 tig00020614_g12152.t1 Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder
Dusal.0033s00033.1 33202502 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
Dusal.0476s00007.1 33198117 SNF2-related, N-terminal domain; Helicase, C-terminal... 0.02 OrthoFinder
EOD21201 No alias SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder
EOD37408 No alias SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder
EOD38972 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
PTI_14G01170.1 No alias Helicase, C-terminal; Bromodomain; SNF2-related,... 0.02 OrthoFinder
XM_002499964.1 MICPUN_99013, 99013 SNF2 super family (RAD54B) 0.04 OrthoFinder
XM_002502147.1 MICPUN_58699, 58699 SNF2 super family 0.05 OrthoFinder
XM_002508265.1 MICPUN_60933, 60933 SNF2 super family (RAD54) 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 158 459
IPR001650 Helicase_C 515 622
No external refs found!