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  5. Cz01g45020.t1

Cz01g45020.t1


Description : AP complex, mu/sigma subunit [Interproscan].


Gene families : OG_01_0000426 (OrthoFinder) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g45020.t1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.8 tig00020780_g13760.t1 AP-2 complex subunit sigma OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre07.g324600 30775415, AP2S2 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder
Cre07.g330950 30774543, AP4S4 Vesicle trafficking.endomembrane trafficking.vacuolar... 0.06 OrthoFinder
Cre09.g394100 30781425, AP1S1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder
Dusal.0133s00027.1 33199133 AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
EOD06805 No alias Aps1, sigma subunit of the adaptin 1 complex [Ensembl]. 0.02 OrthoFinder
OT_10G02560.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
OT_16G00570.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
PTI_18G01760.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
Sro782_g201730.1 Contig2391.g19597 AP-2 complex subunit sigma 0.02 OrthoFinder
Transcript_contig_55878 55878 AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
Vocar.0003s0186.1 32888981 AP complex, mu/sigma subunit [Interproscan]. 0.04 OrthoFinder
XM_002503387.1 MICPUN_83744, 83744 AP complex, mu/sigma subunit [Interproscan]. 0.06 OrthoFinder
XM_003061069.1 MicpuC2_45744, 45744 AP complex, mu/sigma subunit [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
BP GO:0031023 microtubule organizing center organization IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0047750 cholestenol delta-isomerase activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 129
No external refs found!