Cz01g45010.t1


Description : Ribosomal protein L17 [Interproscan].


Gene families : OG_01_0000944 (OrthoFinder) Phylogenetic Tree(s): OG0000944_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g45010.t1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cre02.g108850 30784955, PRPL17 Protein biosynthesis.organelle translation... 0.05 OrthoFinder
OT_01G06040.1 No alias Ribosomal protein L17 [Interproscan]. 0.03 OrthoFinder
PTI_01G03920.1 No alias Ribosomal protein L17 [Interproscan]. 0.03 OrthoFinder
Vocar.0008s0070.1 32897191 Ribosomal protein L17 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 1 67
No external refs found!