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  5. Cz01g40050.t1

Cz01g40050.t1


Description : Leucine-rich repeat; Domain of unknown function DUF4476 [Interproscan].


Gene families : OG_01_0006374 (OrthoFinder) Phylogenetic Tree(s): OG0006374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g40050.t1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Vocar.0005s0341.1 32883639 Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR028011 DUF4476 1303 1362
IPR001611 Leu-rich_rpt 897 917
IPR001611 Leu-rich_rpt 869 890
IPR001611 Leu-rich_rpt 841 860
IPR001611 Leu-rich_rpt 781 802
No external refs found!