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  5. Cz01g36080.t1

Cz01g36080.t1


Description : Protein of unknown function UPF0301 [Interproscan].


Gene families : OG_01_0000409 (OrthoFinder) Phylogenetic Tree(s): OG0000409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g36080.t1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Dusal.0026s00038.1 33185377 Protein of unknown function UPF0301 [Interproscan]. 0.02 OrthoFinder
Sro864_g212620.1 Contig2395.g19634 Uncharacterized ACR, COG1678 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
InterPro domains Description Start Stop
IPR003774 UPF0301 142 306
No external refs found!