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  5. Cz01g35130.t1

Cz01g35130.t1


Description : Blue (type 1) copper domain [Interproscan].


Gene families : OG_01_0004408 (OrthoFinder) Phylogenetic Tree(s): OG0004408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g35130.t1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cre03.g182551 30787991, PCY1 Photosynthesis.photophosphorylation.Cytb6/f to PS-I... 0.22 OrthoFinder
Dusal.0268s00024.1 33190619 Blue (type 1) copper domain [Interproscan]. 0.02 OrthoFinder
OT_09G04300.1 No alias Blue (type 1) copper domain [Interproscan]. 0.1 OrthoFinder
Vocar.0015s0272.1 32898924 Blue (type 1) copper domain [Interproscan]. 0.07 OrthoFinder
XM_002504026.1 MICPUN_60322, 60322 Plastocyanin, chloroplast precursor (PETE) 0.05 OrthoFinder
XM_003059555.1 MicpuC2_59039, 59039 Plastocyanin, chloroplast precursor (PETE) 0.06 OrthoFinder
lcl|BLLF01000003.1_cds_GFH05618.1_95 HaLaN_00115, GFH05618 Plastocyanin 0.09 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33178.1_3440 PRW33178 Chloroplast precursor 0.18 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
CC GO:0034357 photosynthetic membrane IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
CC GO:0042651 thylakoid membrane IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000923 BlueCu_1 57 102
No external refs found!