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  5. Cz01g34190.t1

Cz01g34190.t1


Description : Reverse transcriptase, RNA-dependent DNA polymerase; Integrase, catalytic core [Interproscan].


Gene families : OG_01_0000023 (OrthoFinder) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g34190.t1

Target Alias Description ECC score Gene Family Method Actions
Cz01g34170.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase;... 0.04 OrthoFinder
Cz02g21230.t1 No alias Ribonuclease H domain [Interproscan]. 0.02 OrthoFinder
Cz03g25140.t1 No alias Ribonuclease H domain [Interproscan]. 0.05 OrthoFinder
Cz03g25170.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
Cz04g09130.t1 No alias Hypothetical protein 0.1 OrthoFinder
Cz16g05020.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz17g17250.t1 No alias Hypothetical protein 0.02 OrthoFinder
UNPLg00679.t1 No alias Hypothetical protein 0.02 OrthoFinder
UNPLg00762.t1 No alias Hypothetical protein 0.01 OrthoFinder
UNPLg00808.t1 No alias Hypothetical protein 0.11 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 349 551
IPR001584 Integrase_cat-core 1 109
No external refs found!