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  5. Cz01g34120.t1

Cz01g34120.t1


Description : Ribonuclease H domain [Interproscan].


Gene families : OG_01_0000023 (OrthoFinder) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g34120.t1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cz02g21030.t1 No alias gag-polypeptide of LTR copia-type; Zinc finger,... 0.08 OrthoFinder
Cz02g21050.t1 No alias gag-polypeptide of LTR copia-type [Interproscan]. 0.05 OrthoFinder
Cz02g21080.t1 No alias GAG-pre-integrase domain; Integrase, catalytic core... 0.08 OrthoFinder
Cz02g21180.t1 No alias gag-polypeptide of LTR copia-type [Interproscan]. 0.05 OrthoFinder
Cz02g21270.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
Cz02g21290.t1 No alias Hypothetical protein 0.03 OrthoFinder
Cz03g25180.t1 No alias Hypothetical protein 0.08 OrthoFinder
Cz03g25190.t1 No alias Hypothetical protein 0.08 OrthoFinder
Cz04g09130.t1 No alias Hypothetical protein 0.06 OrthoFinder
Cz15g15050.t1 No alias gag-polypeptide of LTR copia-type [Interproscan]. 0.03 OrthoFinder
UNPLg00808.t1 No alias Hypothetical protein 0.06 OrthoFinder
UNPLg00843.t1 No alias Hypothetical protein 0.08 OrthoFinder
UNPLg00866.t1 No alias Hypothetical protein 0.1 OrthoFinder
lcl|BLLF01000873.1_cds_GFH15607.1_10084 HaLaN_11860, GFH15607 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 45 166
No external refs found!