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  5. Cz01g29200.t1

Cz01g29200.t1


Description : ABC-2 type transporter; ABC transporter-like [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g29200.t1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cz02g11190.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.06 OrthoFinder
Cz03g01010.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.06 OrthoFinder
Cz12g14180.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001430.1_cds_GFH19246.1_13723 HaLaN_16164, GFH19246 ABC transporter domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 504 715
IPR003439 ABC_transporter-like_ATP-bd 128 279
No external refs found!