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  5. Cz01g29020.t1

Cz01g29020.t1


Description : Translocon Sec61/SecY, plug domain; SecY/SEC61-alpha family [Interproscan].


Gene families : OG_01_0002411 (OrthoFinder) Phylogenetic Tree(s): OG0002411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g29020.t1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
PTI_27G00750.1 No alias SecY/SEC61-alpha family; Translocon Sec61/SecY, plug... 0.02 OrthoFinder
Transcript_contig_54530 54530 SecY/SEC61-alpha family; Translocon Sec61/SecY, plug... 0.02 OrthoFinder
XM_002504940.1 MICPUN_95488, 95488 Type II secretory pathway family (SEC61a) 0.04 OrthoFinder
lcl|BLLF01000001.1_cds_GFH05551.1_28 HaLaN_00031, GFH05551 Protein transport protein Sec61 subunit alpha 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61345.1_350 PRW61345 Transport Sec61 subunit alpha-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002208 SecY/SEC61-alpha 75 459
IPR019561 Translocon_Sec61/SecY_plug_dom 40 74
No external refs found!