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  5. Cz01g28090.t1

Cz01g28090.t1


Description : MCM, AAA-lid domain; MCM OB domain; MCM domain; Mcm6, C-terminal winged-helix domain; MCM N-terminal domain [Interproscan].


Gene families : OG_01_0000321 (OrthoFinder) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g28090.t1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.38 tig00000241_g20896.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.03 OrthoFinder
Cpa|evm.model.tig00020918.5 tig00020918_g15883.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.05 OrthoFinder
Cre03.g178650 30786765, MCM6 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.08 OrthoFinder
Cre10.g455850 30790894, MCM7 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.09 OrthoFinder
EOD16317 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.03 OrthoFinder
EOD19125 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.03 OrthoFinder
EOD29724 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.04 OrthoFinder
OT_01G02550.1 No alias MCM, AAA-lid domain; MCM OB domain; Mcm6, C-terminal... 0.1 OrthoFinder
OT_05G01710.1 No alias MCM, AAA-lid domain; MCM domain; MCM OB domain [Interproscan]. 0.07 OrthoFinder
PTI_06G04900.1 No alias MCM domain; MCM, AAA-lid domain; MCM OB domain [Interproscan]. 0.03 OrthoFinder
PTI_11G01130.1 No alias MCM domain; MCM, AAA-lid domain; MCM OB domain [Interproscan]. 0.01 OrthoFinder
Sro1053_g235850.1 Contig4118.g31456 Zygotic DNA replication licensing factor mcm3 0.01 OrthoFinder
TP05G04710.1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56242 56242 MCM domain; MCM N-terminal domain; MCM OB domain [Interproscan]. 0.07 OrthoFinder
Transcript_contig_67540 67540 MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.06 OrthoFinder
Vocar.0015s0342.1 32899062 MCM OB domain; MCM N-terminal domain; Mcm6, C-terminal... 0.05 OrthoFinder
Vocar.0028s0155.1 32895592 MCM, AAA-lid domain; MCM N-terminal domain; MCM OB... 0.05 OrthoFinder
lcl|BLLF01001170.1_cds_GFH17581.1_12058 HaLaN_14243, GFH17581 DNA replication licensing factor MCM7 0.05 OrthoFinder
lcl|BLLF01001600.1_cds_GFH20235.1_14712 HaLaN_17325, GFH20235 DNA helicase 0.02 OrthoFinder
lcl|BLLF01002739.1_cds_GFH25166.1_19643 HaLaN_23090, GFH25166 DNA helicase 0.06 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57124.1_9129 PRW57124 DNA replication licensing factor MCM7 0.07 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33036.1_3726 PRW33036 DNA replication licensing factor Mcm6 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499259.1_8212 KAA8499259 DNA replication licensing factor mcm6 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043462 regulation of ATPase activity IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051095 regulation of helicase activity IEP Enrichment
BP GO:0051097 negative regulation of helicase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR033762 MCM_OB 132 262
IPR041024 Mcm6_C 755 906
IPR001208 MCM_dom 346 568
IPR041562 MCM_lid 584 669
IPR027925 MCM_N 17 124
No external refs found!