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  5. Cz01g26250.t1

Cz01g26250.t1


Description : tRNA synthetases class I, catalytic domain [Interproscan].


Gene families : OG_01_0001653 (OrthoFinder) Phylogenetic Tree(s): OG0001653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g26250.t1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
EOD06158 No alias tRNA synthetases class I, catalytic domain [Interproscan]. 0.04 OrthoFinder
OT_03G05180.1 No alias tRNA synthetases class I, catalytic domain [Interproscan]. 0.02 OrthoFinder
XM_003062710.1 MicpuC2_22077, 22077 tRNA synthetases class I, catalytic domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33975.1_2990 PRW33975 Cysteinyl-tRNA synthetase isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR032678 tRNA-synt_1_cat_dom 1 395
No external refs found!