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  5. Cz01g25220.t1

Cz01g25220.t1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002693 (OrthoFinder) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g25220.t1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.20 tig00000157_g9607.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 OrthoFinder
Cre03.g168450 30788210, CCT8 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.14 OrthoFinder
Dusal.0656s00001.1 33192410 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
EOD37191 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.1 OrthoFinder
OT_03G03560.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
Sro163_g073140.1 Contig1793.g15847 Complex protein 1 subunit theta 0.11 OrthoFinder
TP06G04660.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
Transcript_contig_54448 54448 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Vocar.0040s0089.1 32886233 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
XM_002499420.1 MICPUN_104761, 104761 TCP-1/cpn60 chaperonin family protein (TCP-1) 0.07 OrthoFinder
XM_003055695.1 MicpuC2_31125, 31125 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000604.1_cds_GFH13366.1_7843 HaLaN_09237, GFH13366 Chaperonin complex component 0.06 OrthoFinder
lcl|BLLF01000604.1_cds_GFH13367.1_7844 HaLaN_09238, GFH13367 Chaperonin complex component 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56475.1_9784 PRW56475 T-complex 1 subunit theta 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491814.1_4822 KAA8491814 T-complex protein 1 subunit theta 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 1 107
No external refs found!