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  5. Cz01g20010.t1

Cz01g20010.t1


Description : GTP-binding protein LepA, C-terminal; Elongation factor EFG, domain V-like; Transcription factor, GTP-binding domain [Interproscan].


Gene families : OG_01_0000765 (OrthoFinder) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g20010.t1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.140 tig00021127_g18821.t1 Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor 0.04 OrthoFinder
PTI_18G02400.1 No alias Transcription factor, GTP-binding domain; Elongation... 0.02 OrthoFinder
Sro188_g081210.1 Contig1383.g12722 Elongation factor 4 0.02 OrthoFinder
Sro371_g128610.1 Contig736.g8439 Elongation factor 4 0.04 OrthoFinder
TP03G06260.1 No alias Transcription factor, GTP-binding domain; GTP-binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR013842 LepA_CTD 673 779
IPR000640 EFG_V-like 621 668
IPR000795 T_Tr_GTP-bd_dom 142 317
No external refs found!