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  5. Cz01g18100.t1

Cz01g18100.t1


Description : Sde2, N-terminal ubiquitin domain [Interproscan].


Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g18100.t1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
XM_002508129.1 MICPUN_60632, 60632 Ubiquitin 0.03 OrthoFinder
lcl|BLLF01002210.1_cds_GFH23181.1_17658 HaLaN_20757, GFH23181 Cytoplasmic ribosomal protein 79 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45491.1_1276 PRW45491 40S ribosomal S27 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498688.1_7641 KAA8498688 Protein SDE2-like 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
InterPro domains Description Start Stop
IPR024974 Sde2_N 53 152
No external refs found!