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  5. Cz01g11150.t1

Cz01g11150.t1


Description : Cyclin, N-terminal [Interproscan].


Gene families : OG_01_0000580 (OrthoFinder) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g11150.t1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.112 tig00020614_g12229.t1 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 OrthoFinder
Dusal.0023s00043.1 33198024 Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
Dusal.0848s00001.1 33198745 Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
Vocar.0057s0006.1 32894712 Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
XM_003062930.1 MicpuC2_3819, 3819 Hypothetical protein (CYCD1) 0.02 OrthoFinder
lcl|BLLF01001006.1_cds_GFH16502.1_10979 HaLaN_12930, GFH16502 Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39204.1_2647 PRW39204 Cyclin-L1-1 isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 12 97
No external refs found!