Cz01g08210.t1

Description : Ribosomal protein L38e [Interproscan].

Gene families : OG_01_0004462 (OrthoFinder) Phylogenetic Tree(s): OG0004462_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz01g08210.t1
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021719.6	tig00021719_g23151.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.19	OrthoFinder
Cre07.g325746	30775115, RPL38	Protein biosynthesis.cytosolic ribosome.large subunit...	0.3	OrthoFinder
Dusal.0190s00012.1	33189449	Ribosomal protein L38e [Interproscan].	0.11	OrthoFinder
OT_11G02560.1	No alias	Ribosomal protein L38e [Interproscan].	0.1	OrthoFinder
PTI_05G02170.1	No alias	Ribosomal protein L38e [Interproscan].	0.22	OrthoFinder
TP02G00250.1	No alias	Ribosomal protein L38e [Interproscan].	0.16	OrthoFinder
Transcript_contig_61849	61849	Ribosomal protein L38e [Interproscan].	0.02	OrthoFinder
Vocar.0003s0165.1	32889359	Ribosomal protein L38e [Interproscan].	0.07	OrthoFinder
XM_002508915.1	MICPUN_63254, 63254	Ribosomal protein L38e [Interproscan].	0.16	OrthoFinder
XM_003061755.1	MicpuC2_51368, 51368	Ribosomal protein L38e [Interproscan].	0.1	OrthoFinder
lcl\|LHPG02000004.1_cds_PRW59048.1_7123	PRW59048	60S ribosomal L38	0.06	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497647.1_6600	KAA8497647	60S ribosomal protein L38	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	Enrichment
CC	GO:0016272	prefoldin complex	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002675	Ribosomal_L38e	2	69

External Links

No external refs found!

Cz01g08210.t1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation