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  5. Cz01g07180.t1

Cz01g07180.t1


Description : Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan].


Gene families : OG_01_0000476 (OrthoFinder) Phylogenetic Tree(s): OG0000476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g07180.t1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.67 tig00000076_g2367.t1 Cyclin-A2-1 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Cpa|evm.model.tig00000769.38 tig00000769_g4035.t1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 OrthoFinder
Cpa|evm.model.tig00021312.11 tig00021312_g20047.t1 G2/mitotic-specific cyclin S13-6 OS=Glycine max 0.03 OrthoFinder
Cre03.g207900 30787688, CYCA1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.07 OrthoFinder
Cre08.g370401 30773725 Cyclin-B2-2 OS=Arabidopsis thaliana 0.06 OrthoFinder
Dusal.0008s00039.1 33198871 Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.09 OrthoFinder
Dusal.0268s00009.1 33190603 Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.07 OrthoFinder
EOD13446 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.04 OrthoFinder
EOD40142 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.1 OrthoFinder
OT_01G06190.1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.08 OrthoFinder
PTI_09G01170.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
PTI_09G03600.1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
Sro251_g099220.1 Contig687.g8002 B-type cyclin 0.05 OrthoFinder
Sro331_g119100.1 Contig3186.g25147 B-type cyclin 0.01 OrthoFinder
Sro70_g038790.1 CYCB1 G2/mitotic-specific cyclin 0.01 OrthoFinder
TP04G02890.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.01 OrthoFinder
TP04G05450.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.03 OrthoFinder
TP10G00850.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.05 OrthoFinder
Vocar.0011s0177.1 32895185 Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.06 OrthoFinder
Vocar.0037s0088.1 32897567 Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.06 OrthoFinder
XM_002508595.1 MICPUN_95175, 95175 Hypothetical protein (CYCB) 0.04 OrthoFinder
XM_003062715.1 MicpuC2_36034, 36034 Hypothetical protein (CYCB) 0.02 OrthoFinder
lcl|BLLF01000053.1_cds_GFH06727.1_1204 HaLaN_01405, GFH06727 Cyclin N-terminal domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002678.1_cds_GFH24956.1_19433 HaLaN_22838, GFH24956 Cyclin N-terminal domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002678.1_cds_GFH24957.1_19434 HaLaN_22839, GFH24957 Cyclin N-terminal domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56788.1_9556 PRW56788 B-type cyclin isoform B 0.07 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495714.1_1712 KAA8495714 G2/mitotic-specific cyclin-A 0.06 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492954.1_2690 KAA8492954 Cyclin-B2-2 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 279 395
IPR006671 Cyclin_N 151 276
No external refs found!