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  5. Cz01g06260.t1

Cz01g06260.t1


Description : ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g06260.t1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_3651 3651 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003257.1_cds_GFH26836.1_21313 HaLaN_25054, GFH26836 AAA domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20261.1_5630 PRW20261 Spermatogenesis-associated 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 475 552
IPR003959 ATPase_AAA_core 923 1054
No external refs found!