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Description : Exonuclease, RNase T/DNA polymerase III [Interproscan].
Gene families : OG_01_0000873 (OrthoFinder) Phylogenetic Tree(s): OG0000873_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz01g02030.t1 | |
| Cluster | HCCA: Cluster_150 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre11.g480060 | 30775535 | No description available | 0.03 | OrthoFinder | |
| OT_02G02480.1 | No alias | Ribonuclease H domain; Exonuclease, RNase T/DNA... | 0.03 | OrthoFinder | |
| OT_03G01160.1 | No alias | Exonuclease, RNase T/DNA polymerase III [Interproscan]. | 0.02 | OrthoFinder | |
| Sro246_g097710.1 | Contig171.g1955 | Interferon-stimulated 20 kDa exonuclease-like 2 | 0.02 | OrthoFinder | |
| SymbC1.scaffold199.7 | 199.7 | Hypothetical protein | 0.02 | OrthoFinder | |
| lcl|VRMN01000007.1_cds_KAA8493352.1_9653 | KAA8493352 | RNA exonuclease 4 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Enrichment |
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Enrichment |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Enrichment |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| MF | GO:0015923 | mannosidase activity | IEP | Enrichment |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0016197 | endosomal transport | IEP | Enrichment |
| BP | GO:0016482 | cytosolic transport | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| MF | GO:0034061 | DNA polymerase activity | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Enrichment |
| BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043486 | histone exchange | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013520 | Exonuclease_RNaseT/DNA_pol3 | 323 | 474 |
| No external refs found! |