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  5. Cz01g01140.t1

Cz01g01140.t1


Description : Helicase, C-terminal; SNF2-related, N-terminal domain; Zinc finger, C3HC4 type (RING finger) [Interproscan].


Gene families : OG_01_0003332 (OrthoFinder) Phylogenetic Tree(s): OG0003332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g01140.t1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001304.2 tig00001304_g8104.t1 DNA repair protein RAD5B OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre03.g210625 30787475 DNA repair protein RAD5A OS=Arabidopsis thaliana 0.03 OrthoFinder
EOD31805 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 689 803
IPR000330 SNF2_N 220 562
No external refs found!