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  5. Transcript_contig_90956

Transcript_contig_90956 (90956)


Aliases : 90956

Description : Hypothetical protein


Gene families : OG_01_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_90956
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
EOD38954 No alias UmuC domain [Interproscan]. 0.01 OrthoFinder
TP09G02630.1 No alias UmuC domain; SAC3/GANP/THP3 [Interproscan]. 0.01 OrthoFinder
Vocar.0006s0475.1 32894021 DNA polymerase, Y-family, little finger domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58738.1_7493 PRW58738 DNA polymerase eta isoform A 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!