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  5. Transcript_contig_90600

Transcript_contig_90600 (90600)


Aliases : 90600

Description : Ribosomal protein S9 [Interproscan].


Gene families : OG_01_0003842 (OrthoFinder) Phylogenetic Tree(s): OG0003842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_90600
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000123.14 tig00000123_g6920.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cre13.g573351 30784543 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Dusal.0024s00015.1 33202210 Ribosomal protein S9 [Interproscan]. 0.04 OrthoFinder
OT_05G03950.1 No alias Ribosomal protein S9 [Interproscan]. 0.05 OrthoFinder
PTI_01G05180.1 No alias Ribosomal protein S9 [Interproscan]. 0.05 OrthoFinder
Sro245_g097460.1 Contig3087.g24617 40S ribosomal protein S16 0.06 OrthoFinder
TP04G04250.1 No alias Ribosomal protein S9 [Interproscan]. 0.05 OrthoFinder
Vocar.0001s0196.1 32884947 Ribosomal protein S9 [Interproscan]. 0.03 OrthoFinder
XM_002500943.1 MICPUN_93705, 93705 Ribosomal protein S9 [Interproscan]. 0.06 OrthoFinder
XM_003056840.1 MicpuC2_62402, 62402 Ribosomal protein S9 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003770.1_cds_GFH28167.1_22644 HaLaN_26611, GFH28167 Ribosomal protein S9 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57188.1_8811 PRW57188 40S ribosomal S16 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499795.1_8748 KAA8499795 40S ribosomal protein S16-1 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 9 141
No external refs found!