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  5. Transcript_contig_90242

Transcript_contig_90242 (90242)


Aliases : 90242

Description : Glyoxalase/fosfomycin resistance/dioxygenase domain [Interproscan].


Gene families : OG_01_0000902 (OrthoFinder) Phylogenetic Tree(s): OG0000902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_90242
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cz09g09150.t1 No alias Glyoxalase/fosfomycin resistance/dioxygenase domain... 0.01 OrthoFinder
SymbC1.scaffold2461.10 2461.10 Glyoxalase/fosfomycin resistance/dioxygenase domain... 0.01 OrthoFinder
Vocar.0009s0073.1 32893547 Glyoxalase/fosfomycin resistance/dioxygenase domain... 0.02 OrthoFinder
lcl|BLLF01000731.1_cds_GFH14485.1_8962 HaLaN_10549, GFH14485 Hypothetical protein 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494566.1_3096 KAA8494566 Lactoylglutathione lyase 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 50 170
IPR004360 Glyas_Fos-R_dOase_dom 182 300
No external refs found!