Aliases : 90232
Description : LOG family [Interproscan].
Gene families : OG_01_0002246 (OrthoFinder) Phylogenetic Tree(s): OG0002246_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Transcript_contig_90232 | |
Cluster | HCCA: Cluster_70 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | Enrichment |
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Enrichment |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
BP | GO:0002949 | tRNA threonylcarbamoyladenosine modification | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006400 | tRNA modification | IEP | Enrichment |
BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0008033 | tRNA processing | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
BP | GO:0009056 | catabolic process | IEP | Enrichment |
BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Enrichment |
BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Enrichment |
MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
BP | GO:0046434 | organophosphate catabolic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Enrichment |
BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
MF | GO:0051287 | NAD binding | IEP | Enrichment |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Enrichment |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Enrichment |
MF | GO:0070403 | NAD+ binding | IEP | Enrichment |
BP | GO:0070525 | tRNA threonylcarbamoyladenosine metabolic process | IEP | Enrichment |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
CC | GO:1990234 | transferase complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR031100 | LOG_fam | 71 | 179 |
No external refs found! |