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  5. Transcript_contig_89980

Transcript_contig_89980 (89980)


Aliases : 89980

Description : Serine-threonine/tyrosine-protein kinase, catalytic domain [Interproscan].


Gene families : OG_01_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89980
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001336.13 tig00001336_g8230.t1 Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020603.49 tig00020603_g11780.t1 Probable serine/threonine-protein kinase At1g01540... 0.01 OrthoFinder
Cpa|evm.model.tig00020918.12 tig00020918_g15889.t1 Probable serine/threonine-protein kinase SIS8... 0.01 OrthoFinder
Cpa|evm.model.tig00021319.69 tig00021319_g20261.t1 Probable serine/threonine-protein kinase SIS8... 0.02 OrthoFinder
Cre05.g236216 30783192 Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0080s00012.1 33203938 Serine-threonine/tyrosine-protein kinase, catalytic... 0.02 OrthoFinder
EOD04203 No alias Protein kinase domain [Interproscan]. 0.01 OrthoFinder
EOD39459 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
OT_09G00790.1 No alias Serine-threonine/tyrosine-protein kinase, catalytic... 0.02 OrthoFinder
Vocar.0001s0157.1 32884941 Serine-threonine/tyrosine-protein kinase, catalytic... 0.02 OrthoFinder
Vocar.0018s0005.1 32898641 Serine-threonine/tyrosine-protein kinase, catalytic... 0.02 OrthoFinder
Vocar.0040s0091.1 32886253 Ankyrin repeat-containing domain; Protein kinase domain... 0.01 OrthoFinder
lcl|BLLF01002732.1_cds_GFH25143.1_19620 HaLaN_23062, GFH25143 Mitogen activated protein kinase kinase kinase 3 0.02 OrthoFinder
lcl|BLLF01002770.1_cds_GFH25275.1_19752 HaLaN_23213, GFH25275 Protein kinase domain-containing protein 0.01 OrthoFinder
lcl|BLLF01004021.1_cds_GFH28758.1_23235 HaLaN_27300, GFH28758 Protein kinase domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58265.1_7820 PRW58265 Serine threonine-kinase CTR1 0.03 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33991.1_3028 PRW33991 Serine threonine-kinase CTR1 0.03 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33200.1_3579 PRW33200 Serine threonine-kinase CTR1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 1 163
No external refs found!