Transcript_contig_89977 (89977)

Aliases : 89977

Description : Ribosomal protein L10e/L16 [Interproscan].

Gene families : OG_01_0002492 (OrthoFinder) Phylogenetic Tree(s): OG0002492_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_89977
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001424.5	tig00001424_g8704.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder
Cz05g34280.t1	No alias	Ribosomal protein L10e/L16 [Interproscan].	0.03	OrthoFinder
Dusal.0318s00002.1	33185638	Ribosomal protein L10e/L16 [Interproscan].	0.06	OrthoFinder
OT_03G04340.1	No alias	Ribosomal protein L10e/L16 [Interproscan].	0.05	OrthoFinder
PTI_18G02960.1	No alias	Ribosomal protein L10e/L16 [Interproscan].	0.03	OrthoFinder
TP05G08340.1	No alias	Ribosomal protein L10e/L16 [Interproscan].	0.01	OrthoFinder
XM_002507165.1	MICPUN_93045, 93045	Ribosomal protein L10e/L16 [Interproscan].	0.04	OrthoFinder
XM_003054845.1	MicpuC2_24102, 24102	Ribosomal protein L10e/L16 [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000022.1_cds_PRW20682.1_5260	PRW20682	60S ribosomal L10-3	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004402	histone acetyltransferase activity	IEP	Enrichment
MF	GO:0004749	ribose phosphate diphosphokinase activity	IEP	Enrichment
BP	GO:0006473	protein acetylation	IEP	Enrichment
BP	GO:0006475	internal protein amino acid acetylation	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
BP	GO:0009116	nucleoside metabolic process	IEP	Enrichment
BP	GO:0010921	regulation of phosphatase activity	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
BP	GO:0016569	covalent chromatin modification	IEP	Enrichment
BP	GO:0016570	histone modification	IEP	Enrichment
BP	GO:0016573	histone acetylation	IEP	Enrichment
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Enrichment
MF	GO:0016778	diphosphotransferase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0018193	peptidyl-amino acid modification	IEP	Enrichment
BP	GO:0018205	peptidyl-lysine modification	IEP	Enrichment
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Enrichment
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Enrichment
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Enrichment
BP	GO:0019222	regulation of metabolic process	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0019899	enzyme binding	IEP	Enrichment
MF	GO:0019902	phosphatase binding	IEP	Enrichment
MF	GO:0019903	protein phosphatase binding	IEP	Enrichment
BP	GO:0031323	regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0031399	regulation of protein modification process	IEP	Enrichment
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Enrichment
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Enrichment
BP	GO:0035303	regulation of dephosphorylation	IEP	Enrichment
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Enrichment
BP	GO:0043543	protein acylation	IEP	Enrichment
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Enrichment
BP	GO:0050789	regulation of biological process	IEP	Enrichment
BP	GO:0050790	regulation of catalytic activity	IEP	Enrichment
BP	GO:0050794	regulation of cellular process	IEP	Enrichment
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Enrichment
BP	GO:0051246	regulation of protein metabolic process	IEP	Enrichment
BP	GO:0051336	regulation of hydrolase activity	IEP	Enrichment
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Enrichment
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Enrichment
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Enrichment
BP	GO:0065009	regulation of molecular function	IEP	Enrichment
BP	GO:0080090	regulation of primary metabolic process	IEP	Enrichment
BP	GO:1901657	glycosyl compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR016180	Ribosomal_L10e/L16	13	166

External Links

No external refs found!

Transcript_contig_89977 (89977)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation