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  5. Transcript_contig_89902

Transcript_contig_89902 (89902)


Aliases : 89902

Description : Hypothetical protein


Gene families : OG_01_0001340 (OrthoFinder) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89902
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cre01.g015600 30789658 Protein biosynthesis.translation... 0.02 OrthoFinder
Cz13g19040.t1 No alias HEAT repeat; HEAT-like repeat [Interproscan]. 0.02 OrthoFinder
EOD30427 No alias HEAT-like repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!