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Transcript_contig_89756 (89756)


Aliases : 89756

Description : PAS domain; Signal transduction histidine kinase, dimerisation/phosphoacceptor domain [Interproscan].


Gene families : OG_01_0000313 (OrthoFinder) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89756
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000622.16 tig00000622_g2630.t1 Phototropin-2 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
PTI_22G01390.1 No alias PAS domain; Basic-leucine zipper domain [Interproscan]. 0.02 OrthoFinder
Sro624_g177380.1 Contig2249.g18643 Blue-light-activated histidine kinase 0.02 OrthoFinder
XM_002506242.1 MICPUN_105003, 105003 Blue light receptor 0.03 OrthoFinder
XM_003057226.1 MicpuC2_14678, 14678 PAS domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 169 233
IPR000014 PAS 30 145
No external refs found!