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Transcript_contig_89425 (89425)


Aliases : 89425

Description : Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a oxygenase [Interproscan].


Gene families : OG_01_0001892 (OrthoFinder) Phylogenetic Tree(s): OG0001892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89425
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
Cre01.g043350 30789542, CAO1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder
Dusal.0513s00015.1 33186375 Hypothetical protein 0.01 OrthoFinder
Dusal.0513s00016.1 33186377 Rieske [2Fe-2S] iron-sulphur domain [Interproscan]. 0.02 OrthoFinder
OT_12G01320.1 No alias Pheophorbide a oxygenase [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold21.2 21.2 Rieske [2Fe-2S] iron-sulphur domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000163.1_cds_GFH08461.1_2938 HaLaN_03429, GFH08461 Rieske domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000163.1_cds_GFH08462.1_2939 HaLaN_03430, GFH08462 Chlorophyllide a oxygenase 0.02 OrthoFinder
lcl|BLLF01000394.1_cds_GFH11330.1_5807 HaLaN_06812, GFH11330 Rieske domain-containing protein 0.07 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33562.1_3221 PRW33562 Chlorophyllide a oxygenase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 221 302
IPR013626 PaO 411 500
No external refs found!