Transcript_contig_89407 (89407)


Aliases : 89407

Description : GTP binding domain [Interproscan].


Gene families : OG_01_0000265 (OrthoFinder) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89407
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.63 tig00000655_g2891.t1 No description available 0.01 OrthoFinder
Cz07g15170.t1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
Sro171_g075790.1 Contig113.g1288 GTP-binding protein EngB 0.01 OrthoFinder
XM_002504306.1 MICPUN_71196, 71196 GTP binding domain [Interproscan]. 0.02 OrthoFinder
XM_003064803.1 MicpuC2_7226, 7226 GTP binding domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58204.1_7581 PRW58204 GTP-binding protein 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494924.1_3454 KAA8494924 Putative GTP-binding protein EngB 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 206 323
No external refs found!