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  5. Transcript_contig_894

Transcript_contig_894 (894)


Aliases : 894

Description : PPM-type phosphatase domain [Interproscan].


Gene families : OG_01_0000057 (OrthoFinder) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_894
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Cz17g01030.t1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
TP09G02190.1 No alias PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000046.1_cds_GFH06592.1_1069 HaLaN_01247, GFH06592 PPM-type phosphatase domain-containing protein 0.01 OrthoFinder
lcl|BLLF01006394.1_cds_GFH32210.1_26687 HaLaN_31394, GFH32210 PPM-type phosphatase domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 23 242
No external refs found!