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  5. Transcript_contig_89370

Transcript_contig_89370 (89370)


Aliases : 89370

Description : ATPase, dynein-related, AAA domain; ATPase RavA-like, AAA lid domain [Interproscan].


Gene families : OG_01_0001982 (OrthoFinder) Phylogenetic Tree(s): OG0001982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89370
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Cre13.g603225 30784637 No description available 0.01 OrthoFinder
Sro98_g050600.1 Contig3362.g26352 ATPase RavA 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR041538 RavA-like_AAA_lid 347 417
IPR011704 ATPase_dyneun-rel_AAA 148 275
No external refs found!