Transcript_contig_89322 (89322)


Aliases : 89322

Description : Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a oxygenase [Interproscan].


Gene families : OG_01_0000145 (OrthoFinder) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89322
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020510.21 tig00000889_g5288.t1 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre06.g278245 30778846 Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre13.g583050 30784306 Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz16g19110.t1 No alias Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... 0.01 OrthoFinder
Sro2925_g340380.2 No alias Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... 0.01 OrthoFinder
Vocar.0022s0065.1 32891758 Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 95 175
IPR013626 PaO 305 391
No external refs found!