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  5. Transcript_contig_89306

Transcript_contig_89306 (89306)


Aliases : 89306

Description : SANT/Myb domain; MYB-CC type transcription factor, LHEQLE-containing domain [Interproscan].


Gene families : OG_01_0000283 (OrthoFinder) Phylogenetic Tree(s): OG0000283_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89306
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.75 tig00000076_g2376.t1 No description available 0.01 OrthoFinder
Cre09.g410450 30780486 Transcription factor LUX OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz19g10020.t1 No alias Hypothetical protein 0.02 OrthoFinder
EOD12938 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD29034 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
Vocar.0078s0011.1 32891716 SANT/Myb domain; Signal transduction response regulator,... 0.01 OrthoFinder
XM_003061084.1 MicpuC2_60557, 60557 G2-like myb-family transcription factor 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 219 256
IPR001005 SANT/Myb 52 102
No external refs found!