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  5. Transcript_contig_89201

Transcript_contig_89201 (89201)


Aliases : 89201

Description : Protein of unknown function DUF541 [Interproscan].


Gene families : OG_01_0013366 (OrthoFinder) Phylogenetic Tree(s): OG0013366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89201
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000020.1_cds_PRW21024.1_4862 PRW21024 Membrane isoform A 0.03 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21025.1_4863 PRW21025 Membrane isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR007497 DUF541 33 200
No external refs found!