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  5. Transcript_contig_89162

Transcript_contig_89162 (89162)


Aliases : 89162

Description : Intron-binding protein aquarius, N-terminal; DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase, AAA domain [Interproscan].


Gene families : OG_01_0001568 (OrthoFinder) Phylogenetic Tree(s): OG0001568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89162
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001098.14 tig00001098_g7066.t1 RNA processing.RNA splicing.spliceosome-associated... 0.01 OrthoFinder
Cpa|evm.model.tig00001098.15 tig00001098_g7066.t1 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
Cre06.g300750 30778538 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder
EOD21389 No alias Intron-binding protein aquarius, N-terminal; DNA2/NAM7... 0.02 OrthoFinder
OT_05G00660.1 No alias Intron-binding protein aquarius, N-terminal; DNA2/NAM7... 0.03 OrthoFinder
PTI_05G02040.1 No alias Intron-binding protein aquarius, N-terminal; DNA2/NAM7... 0.01 OrthoFinder
Sro382_g130980.1 Contig4152.g31682 Intron-binding protein aquarius 0.02 OrthoFinder
XM_002507258.1 MICPUN_78105, 78105 DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase,... 0.02 OrthoFinder
lcl|BLLF01000831.1_cds_GFH15297.1_9774 HaLaN_11498, GFH15297 DNA2/NAM7 helicase-like, AAA domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000831.1_cds_GFH15298.1_9775 HaLaN_11499, GFH15298 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58675.1_8199 PRW58675 Intron-binding aquarius 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 1164 1356
IPR041677 DNA2/NAM7_AAA_11 859 1155
IPR032174 Aquarius_N 5 855
No external refs found!