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  5. Transcript_contig_89153

Transcript_contig_89153 (89153)


Aliases : 89153

Description : ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89153
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000769.10 tig00000769_g4005.t1 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00001229.23 tig00001229_g7858.t1 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020830.28 tig00020830_g14409.t1 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre02.g079300 30786252, VPS4 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder
EOD25988 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.01 OrthoFinder
TP01G08640.1 No alias ATPase, AAA-type, core; Vps4 oligomerisation,... 0.01 OrthoFinder
TP01G10410.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.01 OrthoFinder
TP12G00370.1 No alias ATPase, AAA-type, core; Vps4 oligomerisation,... 0.01 OrthoFinder
XM_002504323.1 MICPUN_113360, 113360 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.02 OrthoFinder
XM_003059130.1 MicpuC2_18003, 18003 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
lcl|BLLF01006441.1_cds_GFH32259.1_26736 HaLaN_31449, GFH32259 ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 1291 1423
No external refs found!