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  5. Cpa|evm.model.tig00000889.8

Cpa|evm.model.tig00000889.8 (tig00000889_g5295.t1)


Aliases : tig00000889_g5295.t1

Description : Solute transport.channels.MSL mechanosensitive ion channel


Gene families : OG_01_0000544 (OrthoFinder) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000889.8
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
PTI_04G01120.1 No alias Mechanosensitive ion channel MscS [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0433.1 32885671 Mechanosensitive ion channel MscS [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR006685 MscS_channel 306 509
No external refs found!