Transcript_contig_82529 (82529)


Aliases : 82529

Description : Helicase, C-terminal; Zinc finger, C3HC4 type (RING finger) [Interproscan].


Gene families : OG_01_0000210 (OrthoFinder) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_82529
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Vocar.0057s0016.1 32894709 HIRAN domain; Zinc finger, C3HC4 type (RING finger);... 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59778.1_6324 PRW59778 Helicase-like transcription 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 128 234
No external refs found!