Transcript_contig_82198 (82198)

Aliases : 82198

Description : SBP domain [Interproscan].

Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_82198
Cluster	HCCA: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
Cz02g40170.t1	No alias	SBP domain [Interproscan].	0.01	OrthoFinder
Cz07g32220.t1	No alias	SBP domain [Interproscan].	0.02	OrthoFinder
Transcript_contig_78145	78145	Hypothetical protein	0.02	OrthoFinder
Vocar.0002s0008.1	32891235	SBP domain [Interproscan].	0.02	OrthoFinder
Vocar.0003s0172.1	32888906	SBP domain [Interproscan].	0.02	OrthoFinder
Vocar.0003s0435.1	32889022	SBP domain [Interproscan].	0.02	OrthoFinder
Vocar.0005s0367.1	32883600	SBP domain [Interproscan].	0.01	OrthoFinder
Vocar.0012s0159.1	32894892	SBP domain; BTB/POZ domain [Interproscan].	0.02	OrthoFinder
Vocar.0056s0041.1	32896670	SBP domain [Interproscan].	0.02	OrthoFinder
Vocar.0104s0001.1	32896539	SBP domain [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000027.1_cds_PRW05936.1_5959	PRW05936	Squamosa promoter binding	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004476	mannose-6-phosphate isomerase activity	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0016409	palmitoyltransferase activity	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Enrichment
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	58	108

External Links

No external refs found!