Transcript_contig_80746 (80746)

Aliases : 80746

Description : SBP domain [Interproscan].

Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_80746
Cluster	HCCA: Cluster_177

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g104700	30786376	RNA biosynthesis.transcriptional activation.SBP...	0.01	OrthoFinder
Cre02.g112750	30785823	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder
lcl\|BLLF01005538.1_cds_GFH31331.1_25808	HaLaN_30350, GFH31331	Hypothetical protein	0.01	OrthoFinder
lcl\|LHPG02000005.1_cds_PRW58209.1_7582	PRW58209	Squamosa promoter-binding 19	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Enrichment
BP	GO:0006906	vesicle fusion	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007030	Golgi organization	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
BP	GO:0016050	vesicle organization	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
MF	GO:0017056	structural constituent of nuclear pore	IEP	Enrichment
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
BP	GO:0048280	vesicle fusion with Golgi apparatus	IEP	Enrichment
BP	GO:0048284	organelle fusion	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
BP	GO:0061024	membrane organization	IEP	Enrichment
BP	GO:0061025	membrane fusion	IEP	Enrichment
BP	GO:0090174	organelle membrane fusion	IEP	Enrichment
CC	GO:0098588	bounding membrane of organelle	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	8	36

External Links

No external refs found!