Transcript_contig_80000 (80000)


Aliases : 80000

Description : Phosphoenolpyruvate carboxylase [Interproscan].


Gene families : OG_01_0000735 (OrthoFinder) Phylogenetic Tree(s): OG0000735_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_80000
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.59 tig00021319_g20252.t1 Phosphoenolpyruvate carboxylase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0023s00006.1 33198050 Phosphoenolpyruvate carboxylase [Interproscan]. 0.02 OrthoFinder
EOD14170 No alias Phosphoenolpyruvate carboxylase [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2281.1 2281.1 Phosphoenolpyruvate carboxylase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR021135 PEP_COase 89 212
No external refs found!