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  5. Transcript_contig_79780

Transcript_contig_79780 (79780)


Aliases : 79780

Description : Hypothetical protein


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_79780

Target Alias Description ECC score Gene Family Method Actions
Cre16.g663400 30777714 Solute transport.channels.VCCN chloride anion channel 0.02 OrthoFinder
Dusal.0164s00019.1 33198390 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
EOD05573 No alias Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
EOD07973 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Vocar.0027s0112.1 32887109 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Vocar.0041s0049.1 32888730 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000981.1_cds_GFH16334.1_10811 HaLaN_12731, GFH16334 Bestrophin/UPF0187 [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33726.1_3376 PRW33726 UPF0187 chloroplastic 0.1 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33245.1_3628 PRW33245 UPF0187 chloroplastic 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32665.1_4091 PRW32665 UPF0187 chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!