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  5. Transcript_contig_79128

Transcript_contig_79128 (79128)


Aliases : 79128

Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0008614 (OrthoFinder) Phylogenetic Tree(s): OG0008614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_79128
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Dusal.0209s00019.1 33199666 Regulator of chromosome condensation (RCC1) repeat... 0.01 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33122.1_3562 PRW33122 E3 ISG15-ligase HERC5 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 68 117
No external refs found!