1. Home
  2. Species
  3. Chlorella vulgaris
  4. Sequence
  5. Transcript_contig_78957

Transcript_contig_78957 (78957)


Aliases : 78957

Description : Tetratricopeptide repeat; Tetratricopeptide repeat 1; STI1 domain; Tetratricopeptide repeat 2 [Interproscan].


Gene families : OG_01_0000105 (OrthoFinder) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78957
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cre02.g106850 30786194 No description available 0.03 OrthoFinder
Cre03.g189950 30786610, HOP1 Hsp70-Hsp90 organizing protein OS=Triticum aestivum 0.07 OrthoFinder
Cz01g36070.t1 No alias STI1 domain; Tetratricopeptide repeat; Tetratricopeptide... 0.03 OrthoFinder
Dusal.0176s00014.1 33186029 Hypothetical protein 0.01 OrthoFinder
OT_05G00930.1 No alias Tetratricopeptide repeat 2 [Interproscan]. 0.02 OrthoFinder
OT_06G00670.1 No alias Tetratricopeptide repeat; TPR repeat; STI1 domain [Interproscan]. 0.1 OrthoFinder
PTI_01G02960.1 No alias STI1 domain; Tetratricopeptide repeat; TPR repeat [Interproscan]. 0.04 OrthoFinder
PTI_04G04500.1 No alias TPR repeat [Interproscan]. 0.01 OrthoFinder
Sro1153_g247040.1 Contig4473.g33619 Stress-induced-phosphoprotein 1 0.03 OrthoFinder
Sro1473_g275620.1 Contig4548.g33993 Stress-induced-phosphoprotein 1 0.01 OrthoFinder
Sro741_g195770.1 Contig2851.g22878 Stress-induced-phosphoprotein 1 0.04 OrthoFinder
TP03G03610.1 No alias Tetratricopeptide repeat; TPR repeat; STI1 domain [Interproscan]. 0.04 OrthoFinder
XM_002500337.1 MICPUN_56687, 56687 STI1 domain; Tetratricopeptide repeat 1;... 0.02 OrthoFinder
XM_003059065.1 MicpuC2_33798, 33798 STI1 domain; TPR repeat [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01001096.1_cds_GFH17099.1_11576 HaLaN_13655, GFH17099 Heat shock STI 0.02 OrthoFinder
lcl|BLLF01003214.1_cds_GFH26712.1_21189 HaLaN_24906, GFH26712 TPR_REGION domain-containing protein 0.02 OrthoFinder
lcl|BLLF01003214.1_cds_GFH26713.1_21190 HaLaN_24907, GFH26713 Protein STIP1 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498140.1_7093 KAA8498140 Small glutamine-rich tetratricopeptide repeat-containing... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041243 STI1 291 319
IPR001440 TPR_1 229 262
IPR013105 TPR_2 26 53
No external refs found!