Transcript_contig_78900 (78900)


Aliases : 78900

Description : SANT/Myb domain [Interproscan].


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78900
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000246.1 tig00000246_g21494.t1 Transcription factor MYB3R-3 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000448.26 tig00000448_g858.t1 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder
Cpa|evm.model.tig00001042.7 tig00001042_g6584.t1 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder
Cpa|evm.model.tig00021038.78 tig00021038_g17567.t1 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder
Cre17.g714229 30781658 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder
Cz13g11180.t1 No alias SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
Cz16g00200.t1 No alias SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
Dusal.0270s00001.1 33190010 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
Dusal.0302s00002.1 33200285 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
EOD35386 No alias Myb-like DNA-binding domain [Interproscan]. 0.01 OrthoFinder
OT_16G01130.1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Sro1233_g254780.1 Contig3336.g26176 Myb-related protein A 0.01 OrthoFinder
Sro1466_g275070.1 Contig2211.g18350 Myb-related protein A 0.01 OrthoFinder
TP22G01540.1 No alias Myb-like DNA-binding domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1620.1 32884611 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0488.1 32891022 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
XM_002501945.1 MICPUN_108200, 108200 SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000060.1_cds_GFH06860.1_1337 HaLaN_01568, GFH06860 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44975.1_1767 PRW44975 Transcription factor MYB44-like 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499442.1_8395 KAA8499442 Transcription factor MYB52 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 6 49
IPR001005 SANT/Myb 58 100
No external refs found!