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  5. Transcript_contig_78768

Transcript_contig_78768 (78768)


Aliases : 78768

Description : D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain [Interproscan].


Gene families : OG_01_0001790 (OrthoFinder) Phylogenetic Tree(s): OG0001790_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78768
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cre06.g295450 30778844, HPR1 Photosynthesis.photorespiration.hydroxypyruvate reductase 0.01 OrthoFinder
Cz08g26170.t1 No alias D-isomer specific 2-hydroxyacid dehydrogenase, catalytic... 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60721.1_4595 PRW60721 Glycerate dehydrogenase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0009976 tocopherol cyclase activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006140 D-isomer_DH_NAD-bd 148 320
IPR006139 D-isomer_2_OHA_DH_cat_dom 39 147
No external refs found!